Publication lists for CIDA members

  1. We will provide you with a list of author names and ranks of CIDA members from the last 5 years.
  2. Can you please develop a script in python (or R) to pull the citations and abstracts(?) from google scholar and pubmed (please merge these data sources to not have duplicate citations). You can use R to analysis to build your skills.
  3. I would like to have picture of the distribution (histogram) of the number of papers published per calendar year by individual and by faculty rank. We can give you the faculty rank categories.
  4. I would like to know the mean, median, sd, and interquartile range of the number of publications per person and these numbers by rank. I would like to know the number of journals we have published in and average number and range for the journals.
  5. network graph of connections between team members (Alex has code from a project).
  6. network graph of connections with first and senior authors.
  7. Do these numbers and charts by year from 2017-2023.

The distribution of the number of papers by individual

pub_year mean num_publication num_members
2017 6.909091 152 22
2018 6.068966 176 29
2019 5.270270 195 37
2020 6.138889 221 36
2021 5.347826 246 46
2022 7.555556 340 45
2023 6.434783 296 46

Summary table of publications number per member

CIDA_member Mean Median sd IQR Num_years
Mary Sammel 26.429 23.0 8.522 15.50 7
Alexander Kaizer 24.857 26.0 9.245 10.00 7
Katherina Kechris 14.714 15.0 4.461 6.00 7
Ryan Peterson 10.714 8.0 6.800 10.00 7
Sarah Schmiege 10.571 11.0 3.823 5.50 7
Zachary Giano 9.167 6.5 5.981 7.00 6
Diana Abbott 8.857 8.0 2.854 4.50 7
Sarah Ryan 8.143 8.0 3.532 5.00 7
Bailey Fosdick 7.714 8.0 3.861 6.50 7
Andrew Leroux 7.143 6.0 3.185 5.00 7
Nichole Carlson 7.143 7.0 2.610 3.00 7
Andrew Hammes 7.000 6.0 3.606 3.50 3
Laurel  Beaty 7.000 8.0 3.606 3.50 3
Ying Jin 7.000 7.0 4.163 4.00 7
Siyang Ren 6.750 6.5 4.924 3.75 4
Camille Hochheimer 5.571 6.0 3.047 4.50 7
Kayla Williamson 5.429 6.0 1.988 2.00 7
Laura Kaizer 5.400 3.0 4.159 4.00 5
Conner Jackson 5.200 3.0 3.962 7.00 5
Grace Bosma 5.000 6.0 3.606 3.50 3
Rachel Johnson 4.833 4.0 3.710 4.25 6
Jack Pattee 4.667 3.5 4.033 6.75 6
Heather  Smyth 4.500 4.0 3.209 3.00 6
Bryan McNair 4.286 5.0 1.976 3.00 7
Raymond Pomponio 4.200 5.0 2.775 3.00 5
Luke Patten 4.000 5.0 2.449 3.00 5
Christopher Mancuso 3.833 3.0 3.189 1.50 6
Sierra Niemiec 3.667 4.0 2.517 2.50 3
Cuining Liu 3.571 2.0 3.309 3.00 7
Samantha Roberts 3.429 3.0 1.512 1.50 7
Matthew Bolt 3.400 1.0 3.578 4.00 5
Mengli  Xiao 3.250 3.5 1.708 1.75 4
Yue Wang 3.143 3.0 2.035 1.50 7
Cheyret Wood 3.000 3.0 2.000 2.00 3
Harry Smith 3.000 3.5 1.673 2.50 6
Jared Rieck 3.000 3.0 2.828 2.00 2
Max McGrath 3.000 3.0 NA 0.00 1
Zhixin Lun 2.600 2.0 2.366 1.00 10
Thao Vu 2.167 1.0 1.835 2.25 6
Adane Wogu 2.000 2.0 0.894 1.50 6
William Lippitt 2.000 2.0 1.000 1.00 3
Debmalya Nandy 1.800 1.0 1.304 1.00 5
Mansooreh Ahmadian 1.667 1.0 1.211 0.75 6
Jessica Wild 1.500 1.0 1.000 0.50 4
Emileigh Willems 1.250 1.0 0.500 0.25 4
Colin Hensen 1.000 1.0 0.000 0.00 2
Heather Smyth 1.000 1.0 0.000 0.00 2
Ian Arriaga MacKenzie 1.000 1.0 0.000 0.00 4
Lauren Gunn 1.000 1.0 NA 0.00 1
Shannon Murphy 1.000 1.0 0.000 0.00 2

Journal number

Journal title Num_publications
Fertility And Sterility 186
American Journal Of Obstetrics And Gynecology 90
Blood 44
Obstetrics And Gynecology 38
Gastroenterology 25
Contraception 24
Obesity 20
Plos One 20
Scientific Reports 19
Medrxiv 15
Science Translational Medicine 15
The Journal Of Clinical Endocrinology And Metabolism 14
Biological Psychiatry 12
Biometrics 12
Bmc Bioinformatics 12
Menopause (New York, Ny) 12
The Journal Of Infectious Diseases 12
Alzheimer’s And Dementia 11
Statistics In Medicine 11
Aps March Meeting Abstracts 10
Num_journals Mean Max
948 2.399789 186